NexusPhylogeniesParser (Forester 1.038 API)

public final class NexusPhylogeniesParser
extends Object
implements IteratingPhylogenyParser, PhylogenyParser

Constructors
Constructor and Description
`NexusPhylogeniesParser()`

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`String`	`getName()`
`boolean`	`hasNext()`
`Phylogeny`	`next()`
`Phylogeny[]`	`parse()`
`void`	`reset()`
`void`	`setIgnoreQuotes(boolean ignore_quotes_in_nh_data)`
`void`	`setReplaceUnderscores(boolean replace_underscores)`
`void`	`setSource(Object nexus_source)`
`void`	`setTaxonomyExtraction(NHXParser.TAXONOMY_EXTRACTION taxonomy_extraction)`

Constructor Detail
- NexusPhylogeniesParser
```
public NexusPhylogeniesParser()
```

public final Phylogeny next()
                     throws NHXFormatException,
                            IOException

public final Phylogeny[] parse()
                        throws IOException

public final void reset()
                 throws FileNotFoundException,
                        IOException

public final void setIgnoreQuotes(boolean ignore_quotes_in_nh_data)

public final void setReplaceUnderscores(boolean replace_underscores)

public final void setSource(Object nexus_source)
                     throws PhylogenyParserException,
                            IOException

public final void setTaxonomyExtraction(NHXParser.TAXONOMY_EXTRACTION taxonomy_extraction)

Class NexusPhylogeniesParser