| Package | Description |
|---|---|
| org.forester.io.parsers |
| Modifier and Type | Method and Description |
|---|---|
static HmmscanPerDomainTableParser.FilterType |
HmmscanPerDomainTableParser.FilterType.valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static HmmscanPerDomainTableParser.FilterType[] |
HmmscanPerDomainTableParser.FilterType.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
| Constructor and Description |
|---|
HmmscanPerDomainTableParser(File input_file,
String species,
Set<String> filter,
HmmscanPerDomainTableParser.FilterType filter_type,
HmmscanPerDomainTableParser.INDIVIDUAL_SCORE_CUTOFF individual_cutoff_applies_to) |
HmmscanPerDomainTableParser(File input_file,
String species,
Set<String> filter,
HmmscanPerDomainTableParser.FilterType filter_type,
HmmscanPerDomainTableParser.INDIVIDUAL_SCORE_CUTOFF individual_cutoff_applies_to,
boolean allow_proteins_with_same_name) |
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