Uses of Class
org.forester.go.PfamToGoMapping

Packages that use PfamToGoMapping

Package	Description
org.forester.go
org.forester.go.etc
org.forester.surfacing

Uses of PfamToGoMapping in org.forester.go

Methods in org.forester.go that return types with arguments of type PfamToGoMapping

Modifier and Type	Method and Description
List<PfamToGoMapping>	PfamToGoParser.parse()

Uses of PfamToGoMapping in org.forester.go.etc

Method parameters in org.forester.go.etc with type arguments of type PfamToGoMapping

Modifier and Type	Method and Description
static void	MetaOntologizer.reformat(File ontologizer_outdir, String result_file_prefix, File domain_gain_loss_file, String outfile_base, File obo_file, double p_adjusted_upper_limit, String comment, List<PfamToGoMapping> pfam_to_go)

Uses of PfamToGoMapping in org.forester.surfacing

Method parameters in org.forester.surfacing with type arguments of type PfamToGoMapping

Modifier and Type	Method and Description
static Map<String,List<GoId>>	SurfacingUtil.createDomainIdToGoIdMap(List<PfamToGoMapping> pfam_to_go_mappings)