org.forester.go

Interface GoTerm

All Superinterfaces:

Comparable<GoTerm>, PhylogenyData

All Known Implementing Classes:

BasicGoTerm

public interface GoTerm
extends PhylogenyData, Comparable<GoTerm>

Method Summary

Modifier and Type	Method and Description
List<GoId>	getAltIds()
String	getComment()
String	getDefinition()
GoId	getGoId()
GoNameSpace	getGoNameSpace()
List<GoRelationship>	getGoRelationships()
List<GoSubset>	getGoSubsets()
List<GoXRef>	getGoXRefs()
String	getName()
List<GoId>	getSuperGoIds()
boolean	isObsolete()

Methods inherited from interface org.forester.phylogeny.data.PhylogenyData

asSimpleText, asText, copy, isEqual, toNHX, toPhyloXML

Methods inherited from interface java.lang.Comparable

compareTo

Method Detail

getAltIds

List<GoId> getAltIds()

getComment

String getComment()

getDefinition

String getDefinition()

getGoId

GoId getGoId()

getGoNameSpace

GoNameSpace getGoNameSpace()

getGoRelationships

List<GoRelationship> getGoRelationships()

getGoSubsets

List<GoSubset> getGoSubsets()

getGoXRefs

List<GoXRef> getGoXRefs()

getName

String getName()

getSuperGoIds

List<GoId> getSuperGoIds()

isObsolete

boolean isObsolete()