biojava org.biojava 6.0.0 4.0.0 biojava-protein-comparison-tool biojava-protein-comparison-tool http://source.rcsb.org GNU LGPL v2 http://www.gnu.org/licenses/old-licenses/lgpl-2.1.txt repo maven-shade-plugin package shade false junit:junit net.sourceforge.jmol:jmol javax/vecmath/** org.biojava:biojava-structure demo/DemoFATCAT* demo/DemoCE* *:* META-INF/*.SF META-INF/*.DSA META-INF/*.RSA Open Bioinformatics Foundation Open Bioinformatics Foundation ${project.version} ${project.version} ${project.name} ${project.name} org.biojava.nbio.structure.align.gui.AlignmentGui ${buildNumber} maven-assembly-plugin assemble package single ${project.artifactId}-${project.version} false src/main/assembly/assembly.xml org.codehaus.mojo buildnumber-maven-plugin validate create false false junit junit 4.13.2 test hamcrest-core org.hamcrest UTF-8 yyyyMMdd UTF-8 ${maven.build.timestamp}