com.google.api.services.genomics.v2alpha1

Class Genomics.Pipelines.Run

java.lang.Object

java.util.AbstractMap<String,Object>

com.google.api.client.util.GenericData

com.google.api.client.googleapis.services.AbstractGoogleClientRequest<T>

com.google.api.client.googleapis.services.json.AbstractGoogleJsonClientRequest<T>

com.google.api.services.genomics.v2alpha1.GenomicsRequest<Operation>

com.google.api.services.genomics.v2alpha1.Genomics.Pipelines.Run

All Implemented Interfaces:

Cloneable, Map<String,Object>

Enclosing class:

Genomics.Pipelines

public class Genomics.Pipelines.Run
extends GenomicsRequest<Operation>

Nested Class Summary

Nested classes/interfaces inherited from class com.google.api.client.util.GenericData

GenericData.Flags

Nested classes/interfaces inherited from class java.util.AbstractMap

AbstractMap.SimpleEntry<K,V>, AbstractMap.SimpleImmutableEntry<K,V>

Nested classes/interfaces inherited from interface java.util.Map

Map.Entry<K,V>

Field Summary

Fields inherited from class com.google.api.client.googleapis.services.AbstractGoogleClientRequest

USER_AGENT_SUFFIX

Constructor Summary

Constructors

Modifier	Constructor and Description
protected	Run(RunPipelineRequest content) Runs a pipeline.

Method Summary

Modifier and Type	Method and Description
Genomics.Pipelines.Run	set(String parameterName, Object value)
Genomics.Pipelines.Run	set$Xgafv(String $Xgafv) V1 error format.
Genomics.Pipelines.Run	setAccessToken(String accessToken) OAuth access token.
Genomics.Pipelines.Run	setAlt(String alt) Data format for response.
Genomics.Pipelines.Run	setCallback(String callback) JSONP
Genomics.Pipelines.Run	setFields(String fields) Selector specifying which fields to include in a partial response.
Genomics.Pipelines.Run	setKey(String key) API key.
Genomics.Pipelines.Run	setOauthToken(String oauthToken) OAuth 2.0 token for the current user.
Genomics.Pipelines.Run	setPrettyPrint(Boolean prettyPrint) Returns response with indentations and line breaks.
Genomics.Pipelines.Run	setQuotaUser(String quotaUser) Available to use for quota purposes for server-side applications.
Genomics.Pipelines.Run	setUploadProtocol(String uploadProtocol) Upload protocol for media (e.g.
Genomics.Pipelines.Run	setUploadType(String uploadType) Legacy upload protocol for media (e.g.

Methods inherited from class com.google.api.services.genomics.v2alpha1.GenomicsRequest

get$Xgafv, getAbstractGoogleClient, getAccessToken, getAlt, getCallback, getFields, getKey, getOauthToken, getPrettyPrint, getQuotaUser, getUploadProtocol, getUploadType, setDisableGZipContent, setRequestHeaders

Methods inherited from class com.google.api.client.googleapis.services.json.AbstractGoogleJsonClientRequest

getJsonContent, newExceptionOnError, queue

Methods inherited from class com.google.api.client.googleapis.services.AbstractGoogleClientRequest

buildHttpRequest, buildHttpRequestUrl, buildHttpRequestUsingHead, checkRequiredParameter, execute, executeAndDownloadTo, executeAsInputStream, executeMedia, executeMediaAndDownloadTo, executeMediaAsInputStream, executeUnparsed, executeUsingHead, getDisableGZipContent, getHttpContent, getLastResponseHeaders, getLastStatusCode, getLastStatusMessage, getMediaHttpDownloader, getMediaHttpUploader, getRequestHeaders, getRequestMethod, getResponseClass, getReturnRawInputSteam, getUriTemplate, initializeMediaDownload, initializeMediaUpload, queue, setReturnRawInputStream

Methods inherited from class com.google.api.client.util.GenericData

clone, entrySet, equals, get, getClassInfo, getUnknownKeys, hashCode, put, putAll, remove, setUnknownKeys, toString

Methods inherited from class java.util.AbstractMap

clear, containsKey, containsValue, isEmpty, keySet, size, values

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.Map

compute, computeIfAbsent, computeIfPresent, forEach, getOrDefault, merge, putIfAbsent, remove, replace, replace, replaceAll

Constructor Detail

Run

protected Run(RunPipelineRequest content)

Runs a pipeline. The returned Operation's metadata field will contain a google.genomics.v2alpha1.Metadata object describing the status of the pipeline execution. The [response] field will contain a google.genomics.v2alpha1.RunPipelineResponse object if the pipeline completes successfully. **Note:** Before you can use this method, the Genomics Service Agent must have access to your project. This is done automatically when the Cloud Genomics API is first enabled, but if you delete this permission, or if you enabled the Cloud Genomics API before the v2alpha1 API launch, you must disable and re-enable the API to grant the Genomics Service Agent the required permissions. Authorization requires the following [Google IAM](https://cloud.google.com/iam/) permission: * `genomics.operations.create` [1]: /genomics/gsa Create a request for the method "pipelines.run". This request holds the parameters needed by the the genomics server. After setting any optional parameters, call the AbstractGoogleClientRequest.execute() method to invoke the remote operation.

Genomics.initialize(com.google.api.client.googleapis.services.AbstractGoogleClientRequest) must be called to initialize this instance immediately after invoking the constructor.

Parameters:

content - the RunPipelineRequest

Since:

1.13

Method Detail

set$Xgafv

public Genomics.Pipelines.Run set$Xgafv(String $Xgafv)

Description copied from class: GenomicsRequest

V1 error format.

Overrides:

set$Xgafv in class GenomicsRequest<Operation>

setAccessToken

public Genomics.Pipelines.Run setAccessToken(String accessToken)

Description copied from class: GenomicsRequest

OAuth access token.

Overrides:

setAccessToken in class GenomicsRequest<Operation>

setAlt

public Genomics.Pipelines.Run setAlt(String alt)

Description copied from class: GenomicsRequest

Data format for response.

Overrides:

setAlt in class GenomicsRequest<Operation>

setCallback

public Genomics.Pipelines.Run setCallback(String callback)

Description copied from class: GenomicsRequest

JSONP

Overrides:

setCallback in class GenomicsRequest<Operation>

setFields

public Genomics.Pipelines.Run setFields(String fields)

Description copied from class: GenomicsRequest

Selector specifying which fields to include in a partial response.

Overrides:

setFields in class GenomicsRequest<Operation>

setKey

public Genomics.Pipelines.Run setKey(String key)

Description copied from class: GenomicsRequest

API key. Your API key identifies your project and provides you with API access, quota, and reports. Required unless you provide an OAuth 2.0 token.

Overrides:

setKey in class GenomicsRequest<Operation>

setOauthToken

public Genomics.Pipelines.Run setOauthToken(String oauthToken)

Description copied from class: GenomicsRequest

OAuth 2.0 token for the current user.

Overrides:

setOauthToken in class GenomicsRequest<Operation>

setPrettyPrint

public Genomics.Pipelines.Run setPrettyPrint(Boolean prettyPrint)

Description copied from class: GenomicsRequest

Returns response with indentations and line breaks.

Overrides:

setPrettyPrint in class GenomicsRequest<Operation>

setQuotaUser

public Genomics.Pipelines.Run setQuotaUser(String quotaUser)

Description copied from class: GenomicsRequest

Available to use for quota purposes for server-side applications. Can be any arbitrary string assigned to a user, but should not exceed 40 characters.

Overrides:

setQuotaUser in class GenomicsRequest<Operation>

setUploadType

public Genomics.Pipelines.Run setUploadType(String uploadType)

Description copied from class: GenomicsRequest

Legacy upload protocol for media (e.g. "media", "multipart").

Overrides:

setUploadType in class GenomicsRequest<Operation>

setUploadProtocol

public Genomics.Pipelines.Run setUploadProtocol(String uploadProtocol)

Description copied from class: GenomicsRequest

Upload protocol for media (e.g. "raw", "multipart").

Overrides:

setUploadProtocol in class GenomicsRequest<Operation>

set

public Genomics.Pipelines.Run set(String parameterName,
                                  Object value)

Overrides:

set in class GenomicsRequest<Operation>