htsjdk.beta.plugin.hapref

Interface HaploidReferenceEncoder

All Superinterfaces:

java.lang.AutoCloseable, java.io.Closeable, HtsEncoder<SAMSequenceDictionary,ReferenceSequence>

public interface HaploidReferenceEncoder
extends HtsEncoder<SAMSequenceDictionary,ReferenceSequence>

Base class for all HtsContentType.HAPLOID_REFERENCE encoders.

Method Summary

Methods inherited from interface htsjdk.beta.plugin.HtsEncoder

close, getDisplayName, getFileFormat, getVersion, setHeader, write