htsjdk.variant.vcf

Interfaces

• VCFIDHeaderLine
• VCFIterator
• VCFTextTransformer

Classes

• AbstractVCFCodec
• VCF3Codec
• VCFAltHeaderLine
• VCFCodec
• VCFCompoundHeaderLine
• VCFConstants
• VCFContigHeaderLine
• VCFEncoder
• VCFFileReader
• VCFFilterHeaderLine
• VCFFormatHeaderLine
• VCFHeader
• VCFHeaderLine
• VCFHeaderLineTranslator
• VCFInfoHeaderLine
• VCFIteratorBuilder
• VCFMetaHeaderLine
• VCFPassThruTextTransformer
• VCFPedigreeHeaderLine
• VCFPercentEncodedTextTransformer
• VCFRecordCodec
• VCFSampleHeaderLine
• VCFSimpleHeaderLine
• VCFStandardHeaderLines
• VCFUtils

Enums

• VCFCompoundHeaderLine.SupportedHeaderLineType
• VCFHeader.HEADER_FIELDS
• VCFHeaderLineCount
• VCFHeaderLineType
• VCFHeaderVersion