au.csiro.ontology.util

Class SnomedMetadata

java.lang.Object

au.csiro.ontology.util.SnomedMetadata

public class SnomedMetadata
extends Object

This class contains the default meta-data that is necessary to successfully import the SNOMED distribution files into a DL model.

Author:

Alejandro Metke

Field Summary

Fields

Modifier and Type	Field and Description
static SnomedMetadata	INSTANCE
protected Set<String>	neverGroupedIds
protected Properties	props
protected Map<String,String>	rightIdentities

Method Summary

Methods

Modifier and Type	Method and Description
String	getConceptDefinedId() Returns the id of the enumeration in SNOMED used to indicate that a concept is fully defined.
String	getConceptModelAttId() Returns the root concept id for roles.
String	getDefinitionId() Returns the id of the enumeration in SNOMED used to indicate that a description is a definition.
String	getFsnId() Returns the id of the enumeration in SNOMED used to indicate that a description is a fully specified name.
String	getIsAId() Returns the role id for is-a relationships.
String	getLateralityId()
Set<String>	getNeverGroupedIds() Returns the set of ids of SNOMED roles that should never be placed in a role group.
String	getNeverGroupedIdsString() Returns the raw property value for the never grouped ids.
Map<String,String>	getRightIdentityIds() Returns the right identity axioms that cannot be represented in RF1 or RF2 formats.
String	getRightIdentityIdsString() Returns the raw property value for the right identity ids.
String	getRoleGroupId() Returns the id for the "role group" role.
String	getSomeId() Returns the id of the enumeration in SNOMED used to represent an existential quantification.
String	getSynonymId() Returns the id of the enumeration in SNOMED used to indicate that a description is a synonym.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

INSTANCE

public static final SnomedMetadata INSTANCE

props

protected Properties props

neverGroupedIds

protected Set<String> neverGroupedIds

rightIdentities

protected Map<String,String> rightIdentities

Method Detail

getConceptModelAttId

public String getConceptModelAttId()

Returns the root concept id for roles.

Returns:

The root concept id for roles.

getIsAId

public String getIsAId()

Returns the role id for is-a relationships.

Returns:

The role id for is-a relationships.

getLateralityId

public String getLateralityId()

getConceptDefinedId

public String getConceptDefinedId()

Returns the id of the enumeration in SNOMED used to indicate that a concept is fully defined.

Returns:

Id of the enumeration in SNOMED used to indicate that a concept is fully defined.

getSomeId

public String getSomeId()

Returns the id of the enumeration in SNOMED used to represent an existential quantification.

Returns:

Id of enumeration in SNOMED used to represent an existential quantification.

getFsnId

public String getFsnId()

Returns the id of the enumeration in SNOMED used to indicate that a description is a fully specified name.

Returns:

The id of the enumeration in SNOMED used to indicate that a description is a fully specified name.

getSynonymId

public String getSynonymId()

Returns the id of the enumeration in SNOMED used to indicate that a description is a synonym.

Returns:

Id of the enumeration in SNOMED used to indicate that a description is a synonym.

getDefinitionId

public String getDefinitionId()

Returns the id of the enumeration in SNOMED used to indicate that a description is a definition.

Returns:

Id of enumeration in SNOMED used to indicate that a description is a definition.

getNeverGroupedIdsString

public String getNeverGroupedIdsString()

Returns the raw property value for the never grouped ids.

Returns:

getNeverGroupedIds

public Set<String> getNeverGroupedIds()

Returns the set of ids of SNOMED roles that should never be placed in a role group.

Returns:

Set of ids of SNOMED roles that should never be placed in a role group.

getRightIdentityIdsString

public String getRightIdentityIdsString()

Returns the raw property value for the right identity ids.

Returns:

getRightIdentityIds

public Map<String,String> getRightIdentityIds()

Returns the right identity axioms that cannot be represented in RF1 or RF2 formats. An example is direct-substance o has-active-ingredient [ direct-substance. The key of the returned map is the first element in the LHS and the value is the second element in the LHS. The RHS, because it is a right identity axiom, is always the same as the first element in the LHS.

Returns:

The right identity axioms.

getRoleGroupId

public String getRoleGroupId()

Returns the id for the "role group" role.

Returns:

The id for the "role group" role.