A B C D E F G H I J L M N O P R S T U V W

A

addAttributeColumn(Table, String, Class) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Adds a new column to the specified table with the given title and type of column.

addAttributeColumn(Table, String, Class) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

areEdgesInGraph(Edge[]) - Method in interface org.gephi.datalab.api.GraphElementsController

Checks if an array of edges are contained in the main view graph.

areEdgesInGraph(Edge[]) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

areNodesInGraph(Node[]) - Method in interface org.gephi.datalab.api.GraphElementsController

Checks if an array of nodes are contained in the main view graph.

areNodesInGraph(Node[]) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

AttributeColumnsController - Interface in org.gephi.datalab.api

This interface defines part of the Data Laboratory API basic actions.

AttributeColumnsControllerImpl - Class in org.gephi.datalab.impl

Implementation of the AttributeColumnsController interface declared in the Data Laboratory API.

AttributeColumnsControllerImpl() - Constructor for class org.gephi.datalab.impl.AttributeColumnsControllerImpl

AttributeColumnsManipulator - Interface in org.gephi.datalab.spi.columns

Manipulation action to use for Data Laboratory column manipulator buttons.

AttributeColumnsManipulatorUI - Interface in org.gephi.datalab.spi.columns

UI AttributeColumnsManipulators can provide.

AttributeColumnsMergeStrategiesController - Interface in org.gephi.datalab.api

This interface defines part of the Data Laboratory API basic actions.

AttributeColumnsMergeStrategiesController.BooleanOperations - Enum in org.gephi.datalab.api

Enumeration that defines the supported logic operations for a merge with booleanLogicOperationsMerge strategy.

AttributeColumnsMergeStrategiesController.BooleanOperations() - Constructor for enum org.gephi.datalab.api.AttributeColumnsMergeStrategiesController.BooleanOperations

AttributeColumnsMergeStrategiesControllerImpl - Class in org.gephi.datalab.impl

Implementation of the AttributeColumnsMergeStrategiesController interface declared in the Data Laboratory API.

AttributeColumnsMergeStrategiesControllerImpl() - Constructor for class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

AttributeColumnsMergeStrategy - Interface in org.gephi.datalab.spi.columns.merge

Service for defining strategies for merging attribute columns of a table.

AttributeColumnsMergeStrategyBuilder - Interface in org.gephi.datalab.spi.columns.merge

This interface is used for providing AttributeColumnsMergeStrategy instances using the Netbeans Lookup but avoiding the singleton it causes.

AttributeRowsMergeStrategy - Interface in org.gephi.datalab.spi.rows.merge

Service for defining strategies for merging a column of rows of a table.

AttributeRowsMergeStrategyBuilder - Interface in org.gephi.datalab.spi.rows.merge

This interface is used for providing RowsMergeStrategy instances using the Netbeans Lookup but avoiding the singleton it causes.

AttributeTableCSVExporter - Class in org.gephi.datalab.api.datatables

AttributeTableCSVExporter() - Constructor for class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

AttributeValueManipulator - Interface in org.gephi.datalab.spi.values

Manipulator for a single AttributeValue (cells) on right click.

AttributeValueManipulatorBuilder - Interface in org.gephi.datalab.spi.values

This interface is used for providing AttributeValueManipulator instances using the Netbeans Lookup but avoiding the singleton it causes.

averageNumberMerge(Table, Column[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merges any combination of number or number list columns, calculating the average of all not null values and puts the result of each row in a new column of BIGDECIMAL AttributeType.

averageNumberMerge(Table, Column[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

B

booleanLogicOperationsMerge(Table, Column[], AttributeColumnsMergeStrategiesController.BooleanOperations[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Strategy to apply only to all boolean columns.

booleanLogicOperationsMerge(Table, Column[], AttributeColumnsMergeStrategiesController.BooleanOperations[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

buildEdge(Graph, String, Node, Node, boolean, Object) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

buildNode(Graph, String) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

buildNode(Graph, String, String) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

buildOrderedSupportedTypesList(GraphModel) - Static method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

Build a list of column type wrappers from GraphStore supported types.

C

calculateColumnValuesFrequencies(Table, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Calculates the absolute frequency of appearance of each value of the given column and returns a Map containing each different value mapped to its frequency of appearance.

calculateColumnValuesFrequencies(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

canChangeColumnData(Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Indicates if the Data Laboratory API behaviour allows to change a value of the given column of a table.

canChangeColumnData(Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

canClearColumnData(Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Indicates if the Data Laboratory API behaviour allows to set as null a value of the given column of a table.

canClearColumnData(Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

canConvertColumnToDynamic(Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Indicates if the Data Laboratory API behaviour allows to convert an existing column into its dynamic equivalent.

canConvertColumnToDynamic(Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

canDeleteColumn(Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Indicates if the Data Laboratory API behaviour allows to delete the given column of a table.

canDeleteColumn(Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

canExecute() - Method in interface org.gephi.datalab.spi.Manipulator

Indicates if this Manipulator has to be executable.

canManipulateColumn(Table, Column) - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulator

Indicates if this AttributeColumnsManipulator can manipulate a specific AttributeColumn.

canReplace(SearchReplaceController.SearchResult) - Method in interface org.gephi.datalab.api.SearchReplaceController

Indicates if a SearchResult can be replaced or not.

canReplace(SearchReplaceController.SearchResult) - Method in class org.gephi.datalab.impl.SearchReplaceControllerImpl

checkColumnsAreNumberOrNumberList(Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

checkEdgesToSearch() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Sets edgesToSearch as all edges in the graph if they are null or empty array.

checkNodesToSearch() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Sets nodesToSearch as all nodes in the graph if they are null or empty array.

checkTableAndColumnsAreNumberOrNumberList(Table, Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

checkTableAndOneColumn(Table, Column, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

clearColumnData(Table, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Clears all rows data for a given column of a table (nodes table or edges table)

clearColumnData(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

clearEdgeData(Edge, Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Clears all edge attributes except computed attributes and id.

clearEdgeData(Edge, Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

clearEdgesData(Edge[], Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Clears all the edges attributes except computed attributes and id, checking first that the edges are in the graph.

clearEdgesData(Edge[], Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

clearNodeData(Node, Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Clears all node attributes except computed attributes and id, checking first that the node is in the graph.

clearNodeData(Node, Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

clearNodesData(Node[], Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Clears all the nodes attributes except computed attributes and id.

clearNodesData(Node[], Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

clearRowData(Element, Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Clears row attributes except computed attributes and id if node/edge row.

clearRowData(Element, Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

columnsToSearch - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

compareTo(SupportedColumnTypeWrapper) - Method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

Order for column types by name.

ContextMenuItemManipulator - Interface in org.gephi.datalab.spi

This interface defines a common extension for the manipulators that appear as context menu items such as NodesManipulator, EdgesManipulator and GraphContextMenuItem (from Visualization API)

convertAttributeColumnToDynamic(Table, Column, double, double) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Converts and replaces a table column with a dynamic column preserving original column values.

convertAttributeColumnToDynamic(Table, Column, double, double) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

convertAttributeColumnToNewDynamicColumn(Table, Column, double, double, String) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Converts a table column into a new dynamic column preserving original column values.

convertAttributeColumnToNewDynamicColumn(Table, Column, double, double, String) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

convertColumnToDynamic(Table, Column, double, double, String) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

copyColumnDataToOtherColumn(Table, Column, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Copies all row values of a column to another column.

copyColumnDataToOtherColumn(Table, Column, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

copyEdgeDataToOtherEdges(Edge, Edge[], Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Copies attributes data of the given edge to the other rows except computed attributes and id.

copyEdgeDataToOtherEdges(Edge, Edge[], Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

copyNode(Node, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

copyNodeDataToOtherNodes(Node, Node[], Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Copies attributes data of the given node to the other rows except computed attributes and id.

copyNodeDataToOtherNodes(Node, Node[], Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

copyRowDataToOtherRows(Element, Element[], Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Copies attributes data of the given row to the other rows except computed attributes and id if node/edge.

copyRowDataToOtherRows(Element, Element[], Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

createBooleanMatchesColumn(Table, Column, String, Pattern) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Creates a new BOOLEAN column from the given column and regular expression filling it with boolean values that indicate if each of the old column values match the regular expression.

createBooleanMatchesColumn(Table, Column, String, Pattern) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

createEdge(Node, Node, boolean) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates and edge between source and target node (if it does not already exist), directed or undirected, in the current graph.

createEdge(Node, Node, boolean, Object) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates and edge between source and target node (if it does not already exist), directed or undirected, in the current graph.

createEdge(Node, Node, boolean, Graph) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates and edge between source and target node (if it does not already exist), directed or undirected.

createEdge(Node, Node, boolean, Object, Graph) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates and edge between source and target node (if it does not already exist), directed or undirected.

createEdge(String, Node, Node, boolean) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates and edge between source and target node (if it does not already exist), directed or undirected.

createEdge(String, Node, Node, boolean, Object) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates and edge between source and target node (if it does not already exist), directed or undirected.

createEdge(String, Node, Node, boolean, Graph) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates and edge between source and target node (if it does not already exist), directed or undirected, in the current graph.

createEdge(String, Node, Node, boolean, Object, Graph) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates and edge between source and target node (if it does not already exist), directed or undirected, in the current graph.

createEdge(Node, Node, boolean) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createEdge(Node, Node, boolean, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createEdge(String, Node, Node, boolean) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createEdge(Node, Node, boolean, Object) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createEdge(Node, Node, boolean, Object, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createEdge(String, Node, Node, boolean, Object) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createEdge(String, Node, Node, boolean, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createEdge(String, Node, Node, boolean, Object, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createEdges(Node, Node[], boolean) - Method in interface org.gephi.datalab.api.GraphElementsController

Tries to create edges between the source node and all other edges, directed or undirected.

createEdges(Node, Node[], boolean) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createFoundGroupsListColumn(Table, Column, String, Pattern) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Creates a new LIST_STRING column from the given column and regular expression with values that are the list of matching groups for the given regular expression for each row.

createFoundGroupsListColumn(Table, Column, String, Pattern) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

createNode(String) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates a node with default id and the given label in the current graph.

createNode(String, Graph) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates a node with default id and the given label.

createNode(String, String) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates a node with the given id and label in the current graph.

createNode(String, String, Graph) - Method in interface org.gephi.datalab.api.GraphElementsController

Creates a node with the given id and label.

createNode(String) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createNode(String, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createNode(String, String) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

createNode(String, String, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

D

DataLaboratoryHelper - Class in org.gephi.datalab.api

Helper class for simplifying the use of Data Laboratory API and SPI.

DataLaboratoryHelper() - Constructor for class org.gephi.datalab.api.DataLaboratoryHelper

DataLaboratoryHelper.DialogControlsImpl - Class in org.gephi.datalab.api

DataLaboratoryHelper.DialogControlsImpl(JComponent) - Constructor for class org.gephi.datalab.api.DataLaboratoryHelper.DialogControlsImpl

DataTablesCommonInterface - Interface in org.gephi.datalab.api.datatables

Common interface for DataTablesEventListener and DataTablesController

DataTablesCommonInterface.ExportMode - Enum in org.gephi.datalab.api.datatables

DataTablesCommonInterface.ExportMode() - Constructor for enum org.gephi.datalab.api.datatables.DataTablesCommonInterface.ExportMode

DataTablesController - Interface in org.gephi.datalab.api.datatables

This interface defines part of the Data Laboratory API.

DataTablesControllerImpl - Class in org.gephi.datalab.impl

Implementation of the DataTablesController interface declared in the Data Laboratory API.

DataTablesControllerImpl() - Constructor for class org.gephi.datalab.impl.DataTablesControllerImpl

DataTablesEventListener - Interface in org.gephi.datalab.api.datatables

This is the interface for a listener of DataTablesController requests.

DataTablesEventListenerBuilder - Interface in org.gephi.datalab.api.datatables

Builder interface for providing a default DataTablesEventListener when it has not been set.

DEFAULT_EDGE_WEIGHT - Static variable in class org.gephi.datalab.impl.GraphElementsControllerImpl

DEFAULT_NODE_SIZE - Static variable in class org.gephi.datalab.impl.GraphElementsControllerImpl

DEFAULT_SEPARATOR - Static variable in class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

deleteAttributeColumn(Table, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Deletes the specified column from a table if the table has the column and data laboratory behaviour allows to delete it (see canDeleteColumn method).

deleteAttributeColumn(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

deleteEdge(Edge) - Method in interface org.gephi.datalab.api.GraphElementsController

Tries to delete an edge checking first if it is on the graph.

deleteEdge(Edge) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

deleteEdges(Edge[]) - Method in interface org.gephi.datalab.api.GraphElementsController

Tries to delete an array of edges checking first if they are on the graph.

deleteEdges(Edge[]) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

deleteEdgesWithNodes(Edge[], boolean, boolean) - Method in interface org.gephi.datalab.api.GraphElementsController

Tries to delete an array of edges checking first if they are on the graph and also deletes their source and target node if it is indicated.

deleteEdgesWithNodes(Edge[], boolean, boolean) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

deleteEdgeWithNodes(Edge, boolean, boolean) - Method in interface org.gephi.datalab.api.GraphElementsController

Tries to delete an edge checking first if it is on the graph and also deletes its source and target node if it is indicated.

deleteEdgeWithNodes(Edge, boolean, boolean) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

deleteNode(Node) - Method in interface org.gephi.datalab.api.GraphElementsController

Tries to delete a node checking first if it is on the graph.

deleteNode(Node) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

deleteNodes(Node[]) - Method in interface org.gephi.datalab.api.GraphElementsController

Tries to delete an array of nodes checking first if they are on the graph.

deleteNodes(Node[]) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

detectNodeDuplicatesByColumn(Column, boolean) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Finds and returns nodes duplicates based on the values of a given column of nodes table

detectNodeDuplicatesByColumn(Column, boolean) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

DialogControls - Interface in org.gephi.datalab.spi

An instance of this interface is passed to any type of manipulator UI, allowing the UIs to enable/disable the dialog controls

duplicateColumn(Table, Column, String, Class) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Duplicates a given column of a table and copies al row values.

duplicateColumn(Table, Column, String, Class) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

duplicateNode(Node) - Method in interface org.gephi.datalab.api.GraphElementsController

Duplicates a node if it is in the graph, and returns the new node.

duplicateNode(Node) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

duplicateNodes(Node[]) - Method in interface org.gephi.datalab.api.GraphElementsController

Tries to duplicate an array of nodes with the same behaviour as duplicateNode method.

duplicateNodes(Node[]) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

E

EdgesManipulator - Interface in org.gephi.datalab.spi.edges

Manipulator for edges.

EdgesManipulatorBuilder - Interface in org.gephi.datalab.spi.edges

This interface is used for providing EdgesManipulator instances using the Netbeans Lookup but avoiding the singleton it causes.

edgesToSearch - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

end - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchResult

equals(Object) - Method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

execute(Table, Column) - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulator

Execute this AttributeColumnsManipulator with the indicated table and column

execute() - Method in interface org.gephi.datalab.spi.Manipulator

Execute this Manipulator.

executeAttributeColumnsManipulator(AttributeColumnsManipulator, GraphModel, Table, Column) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares the dialog UI of a AttributeColumnsManipulator if it has one and executes the manipulator in a separate Thread when the dialog is accepted or directly if there is no UI.

executeAttributeColumnsManipulatorInOtherThread(AttributeColumnsManipulator, Table, Column) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

executeManipulator(Manipulator) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares the dialog UI of a manipulator if it has one and executes the manipulator in a separate Thread when the dialog is accepted or directly if there is no UI.

executeManipulatorInOtherThread(Manipulator) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

exportCurrentTable(DataTablesCommonInterface.ExportMode) - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests to exports current table being shown as a file.

exportCurrentTable(DataTablesCommonInterface.ExportMode) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

F

FAKE_COLUMN_EDGE_SOURCE - Static variable in class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

FAKE_COLUMN_EDGE_TARGET - Static variable in class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

FAKE_COLUMN_EDGE_TYPE - Static variable in class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

fillColumnWithValue(Table, Column, String) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Fills the data values of a given column of a table with a value as a String, parsing it for the Class of the column.

fillColumnWithValue(Table, Column, String) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

fillEdgesColumnWithValue(Edge[], Column, String) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Fills the data values of a given column of the indicated edges with a value as a String, parsing it for the Class of the column.

fillEdgesColumnWithValue(Edge[], Column, String) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

fillNodesColumnWithValue(Node[], Column, String) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Fills the data values of a given column of the indicated nodes with a value as a String, parsing it for the Class of the column.

fillNodesColumnWithValue(Node[], Column, String) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

findNext(SearchReplaceController.SearchOptions) - Method in interface org.gephi.datalab.api.SearchReplaceController

Finds next (or first) ocurrence for the given search options.

findNext(SearchReplaceController.SearchResult) - Method in interface org.gephi.datalab.api.SearchReplaceController

Finds next ocurrence for the given search options contained in a SearchResult.

findNext(SearchReplaceController.SearchOptions) - Method in class org.gephi.datalab.impl.SearchReplaceControllerImpl

findNext(SearchReplaceController.SearchResult) - Method in class org.gephi.datalab.impl.SearchReplaceControllerImpl

findOnEdges(SearchReplaceController.SearchOptions, int, int) - Method in class org.gephi.datalab.impl.SearchReplaceControllerImpl

findOnNodes(SearchReplaceController.SearchOptions, int, int) - Method in class org.gephi.datalab.impl.SearchReplaceControllerImpl

firstQuartileNumberMerge(Table, Column[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merges any combination of number or number list columns, calculating the first quartile (Q1) of all not null values and puts the result of each row in a new column of BIGDECIMAL AttributeType.

firstQuartileNumberMerge(Table, Column[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

foundColumnIndex - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchResult

foundEdge - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchResult

foundNode - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchResult

foundRowIndex - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchResult

G

GeneralActionsManipulator - Interface in org.gephi.datalab.spi.general

Manipulator for general actions that don't need to obtain any data before being executed.

getArrayNumbers(Object) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

Works for arrays of primitive and non primitive numbers.

getAttributeColumnsManipulatorByName(String) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Returns the AttributeColumnsMergeStrategy with that class name or null if it does not exist

getAttributeColumnsManipulators() - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares an array that has one instance of every AttributeColumnsManipulator implementation that has a builder registered and returns it.

getAttributeColumnsMergeStrategies() - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares an array that has one new instance of every AttributeColumnsMergeStrategy implementation that is registered.

getAttributeColumnsMergeStrategy() - Method in interface org.gephi.datalab.spi.columns.merge.AttributeColumnsMergeStrategyBuilder

getAttributeColumnsMergeStrategyByName(String) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Returns the AttributeColumnsMergeStrategy with that class name or null if it does not exist

getAttributeRowsMergeStrategies() - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares an array that has one new instance of every AttributeRowsMergeStrategy implementation that is registered.

getAttributeRowsMergeStrategy() - Method in interface org.gephi.datalab.spi.rows.merge.AttributeRowsMergeStrategyBuilder

getAttributeRowsMergeStrategyByName(String) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Returns the AttributeRowsMergeStrategy with that class name or null if it does not exist

getAttributeValueManipulator() - Method in interface org.gephi.datalab.spi.values.AttributeValueManipulatorBuilder

getAttributeValueManipulatorByName(String) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Returns the AttributeColumnsMergeStrategy with that class name or null if it does not exist

getAttributeValueManipulators() - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares an array with one new instance of every AttributeValueManipulator that has a builder registered and returns it.

getColumnNumbers(Table, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Prepares an array with all not null numbers of all the rows of a given column.

getColumnNumbers(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

getColumnsToSearch() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Returns columns indexes to search

getCurrentGraph() - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

**********Private methods : ***********

getDataTablesEventListener() - Method in interface org.gephi.datalab.api.datatables.DataTablesController

Returns the current registered DataTablesEventListener.

getDataTablesEventListener() - Method in interface org.gephi.datalab.api.datatables.DataTablesEventListenerBuilder

Get default implementation

getDataTablesEventListener() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

getDefault() - Static method in class org.gephi.datalab.api.DataLaboratoryHelper

getDescription() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulator

Description of the AttributeColumnsManipulator.

getDescription() - Method in interface org.gephi.datalab.spi.Manipulator

Description of the Manipulator.

getDisplayName() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulatorUI

Returns name/title for the window

getDisplayName() - Method in interface org.gephi.datalab.spi.ManipulatorUI

Returns name/title for the window

getDynamicNumberColumnNumbers(Element, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

Used for obtaining a list of the numbers of row of a dynamic number column.

getEdgesArray() - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

Used for iterating through all edges of the graph

getEdgesCount() - Method in interface org.gephi.datalab.api.GraphElementsController

Returns the number of edges in the graph.

getEdgesCount() - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

getEdgesManipulator() - Method in interface org.gephi.datalab.spi.edges.EdgesManipulatorBuilder

getEdgesManipulatorByName(String) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Returns the AttributeColumnsMergeStrategy with that class name or null if it does not exist

getEdgesManipulators() - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares an array with one new instance of every EdgesManipulator that has a builder registered and returns it.

getEdgesToSearch() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Getters and setters

getEdgeTableSelection() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Request the tables implementation to provide the selected edges in edges table.

getEdgeTableSelection() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

getEnd() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

getFoundColumnIndex() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

getFoundEdge() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

getFoundNode() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

getFoundRowIndex() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

getGeneralActionsManipulatorByName(String) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Returns the AttributeColumnsMergeStrategy with that class name or null if it does not exist

getGeneralActionsManipulators() - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares an array with one instance of every GeneralActionsManipulator that is registered.

getIcon() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulator

Returns an icon for this AttributeColumnsManipulator if necessary.

getIcon() - Method in interface org.gephi.datalab.spi.Manipulator

Returns an icon for this manipulator if necessary.

getMnemonicKey() - Method in interface org.gephi.datalab.spi.ContextMenuItemManipulator

Optional.

getName() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulator

Return name to show for this AttributeColumnsManipulator on the ui.

getName() - Method in interface org.gephi.datalab.spi.Manipulator

Return name to show for this Manipulator on the ui.

getNodeEdges(Node) - Method in interface org.gephi.datalab.api.GraphElementsController

Prepares and returns an array with the edges incident to the specified node.

getNodeEdges(Node) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

getNodeNeighbours(Node) - Method in interface org.gephi.datalab.api.GraphElementsController

Prepares and returns an array with the neighbour nodes of the specified node.

getNodeNeighbours(Node) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

getNodesArray() - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

Used for iterating through all nodes of the graph

getNodesCount() - Method in interface org.gephi.datalab.api.GraphElementsController

Returns the number of nodes in the graph.

getNodesCount() - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

getNodesManipulator() - Method in interface org.gephi.datalab.spi.nodes.NodesManipulatorBuilder

getNodesManipulatorByName(String) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Returns the AttributeColumnsMergeStrategy with that class name or null if it does not exist

getNodesManipulators() - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares an array with one new instance of every NodesManipulator that has a builder registered and returns it.

getNodesToSearch() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

getNodeTableSelection() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Request the tables implementation to provide the selected nodes in nodes table.

getNodeTableSelection() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

getNumberOrNumberListColumnStatistics(Table, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Calculates all statistics at once from a number/number list column using MathUtils class.

getNumberOrNumberListColumnStatistics(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

getPluginGeneralActionsManipulatorByName(String) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Returns the AttributeColumnsMergeStrategy with that class name or null if it does not exist

getPluginGeneralActionsManipulators() - Method in class org.gephi.datalab.api.DataLaboratoryHelper

Prepares an array with one instance of every PluginGeneralActionsManipulator that is registered.

getPosition() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulator

Returns a position value that indicates the position of this AttributeColumnsManipulator in its type group.

getPosition() - Method in interface org.gephi.datalab.spi.Manipulator

Returns a position value that indicates the position of this Manipulator in its type group.

getReducedValue() - Method in interface org.gephi.datalab.spi.rows.merge.AttributeRowsMergeStrategy

This method is always called after the strategy is set up and executed.

getRegexPattern() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

getRegionStart() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

getRowNumbers(Element, Column[]) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Prepares an array with all not null numbers of a row using only the given columns.

getRowNumbers(Element, Column[]) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

getRowsColumnNumbers(Element[], Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Prepares an array only with all not null numbers the indicated rows of a given column.

getRowsColumnNumbers(Element[], Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

getSearchOptions() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

getSettingsPanel() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulatorUI

Returns a settings panel instance for this AttributeColumnsManipulator.

getSettingsPanel() - Method in interface org.gephi.datalab.spi.ManipulatorUI

Returns a settings panel instance for this Manipulator.

getStart() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

getStartingColumn() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

getStartingRow() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

getSubItems() - Method in interface org.gephi.datalab.spi.ContextMenuItemManipulator

This is optional.

getTableAttributeRows(Table) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Returns all rows of a given table (node or edges table).

getTableAttributeRows(Table) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

getTableRowsCount(Table) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Counts the number of rows of a table (nodes or edges table) and returns the result.

getTableRowsCount(Table) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

getTimeIntervalColumn(Table) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

Private methods:

getType() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulator

Type of manipulator.

getType() - Method in interface org.gephi.datalab.spi.Manipulator

Type of manipulator.

getType() - Method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

getUI(Table, Column) - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulator

Returns a ManipulatorUI for this Manipulator if it needs one.

getUI() - Method in interface org.gephi.datalab.spi.Manipulator

Returns a ManipulatorUI for this Manipulator if it needs one.

GraphElementsController - Interface in org.gephi.datalab.api

This interface defines part of the Data Laboratory API basic actions.

GraphElementsControllerImpl - Class in org.gephi.datalab.impl

Implementation of the GraphElementsController interface declared in the Data Laboratory API

GraphElementsControllerImpl() - Constructor for class org.gephi.datalab.impl.GraphElementsControllerImpl

H

hashCode() - Method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

I

importCSVToEdgesTable(Graph, File, Character, Charset, String[], Class[], boolean) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Method for importing csv data to edges table.

importCSVToEdgesTable(Graph, File, Character, Charset, String[], Class[], boolean) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

importCSVToNodesTable(Graph, File, Character, Charset, String[], Class[], boolean) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Method for importing CSV file data to nodes table.

importCSVToNodesTable(Graph, File, Character, Charset, String[], Class[], boolean) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

interQuartileRangeNumberMerge(Table, Column[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merges any combination of number or number list columns, calculating the interquartile range (IQR) of all not null values and puts the result of each row in a new column of BIGDECIMAL AttributeType.

interQuartileRangeNumberMerge(Table, Column[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

isAutoRefreshEnabled() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Gets auto-refresh suspended state.

isAutoRefreshEnabled() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

isAvailable() - Method in interface org.gephi.datalab.spi.ContextMenuItemManipulator

Indicates if this item has to appear in the context menu at all

isDataTablesReady() - Method in interface org.gephi.datalab.api.datatables.DataTablesController

Indicates if Data Table UI is registered as a listener of the events created by this controller.

isDataTablesReady() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

isEdgeColumn(Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

isEdgeColumn(Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

isEdgeInGraph(Edge) - Method in interface org.gephi.datalab.api.GraphElementsController

Checks if an edge is contained in the main view graph.

isEdgeInGraph(Edge) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

isEdgeTable(Table) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Checks if the given table is edges table.

isEdgeTable(Table) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

isEdgeTableMode() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Checks if the data tables implementation is showing edges table

isEdgeTableMode() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

isIntervalType(Class<?>) - Static method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

isLoopToBeginning() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

isModal() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulatorUI

Indicates if the created dialog has to be modal

isModal() - Method in interface org.gephi.datalab.spi.ManipulatorUI

Indicates if the created dialog has to be modal

isNodeColumn(Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

isNodeColumn(Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

isNodeFixed(Node) - Method in interface org.gephi.datalab.api.GraphElementsController

Checks the fixed state of a node.

isNodeFixed(Node) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

isNodeInGraph(Node) - Method in interface org.gephi.datalab.api.GraphElementsController

Checks if a node is contained in the main view graph.

isNodeInGraph(Node) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

isNodeTable(Table) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Checks if the given table is nodes table.

isNodeTable(Table) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

isNodeTableMode() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Checks if the data tables implementation is showing nodes table

isNodeTableMode() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

isOkButtonEnabled() - Method in class org.gephi.datalab.api.DataLaboratoryHelper.DialogControlsImpl

isOkButtonEnabled() - Method in interface org.gephi.datalab.spi.DialogControls

Indicates if ok button is enabled for this dialog at the moment

isOnlyMatchWholeAttributeValue() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

isSearchNodes() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

isShowEdgesNodesLabels() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Checks if the data tables implementation is showing edges nodes (source and target) labels at the moment.

isShowEdgesNodesLabels() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

isShowOnlyVisible() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Checks if the data tables implementation is showing only visible elements (nodes or edges) in the graph at the moment.

isShowOnlyVisible() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

isTableColumn(Table, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

isTableColumn(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

isTimeIntervalGraphics() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Checks if the data tables implementation is showing time intervals as graphics at the moment.

isTimeIntervalGraphics() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

isTimestampType(Class<?>) - Static method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

isTypeAvailable(Class<?>, TimeRepresentation) - Static method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

isUseRegexReplaceMode() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

isUseSparklines() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Checks if the data tables implementation is showing number lists and dynamic numbers as sparklines at the moment.

isUseSparklines() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

J

joinWithSeparatorMerge(Table, Column[], Class, String, String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Joins various columns of any type into a new column using the given separator string (or null).

joinWithSeparatorMerge(Table, Column[], Class, String, String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

L

listener - Variable in class org.gephi.datalab.impl.DataTablesControllerImpl

loopToBeginning - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

M

Manipulator - Interface in org.gephi.datalab.spi

General and abstract manipulation action to use for Data Laboratory table UI and other actions like Graph context menu items in Overview.

ManipulatorUI - Interface in org.gephi.datalab.spi

UI Manipulators can provide.

matchRegex(Object, SearchReplaceController.SearchOptions, int, int, TimeFormat, DateTimeZone) - Method in class org.gephi.datalab.impl.SearchReplaceControllerImpl

maxValueNumbersMerge(Table, Column[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merges any combination of number or number list columns, calculating the maximum value of all not null values and puts the result of each row in a new column of BIGDECIMAL AttributeType.

maxValueNumbersMerge(Table, Column[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

medianNumberMerge(Table, Column[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merges any combination of number or number list columns, calculating the median of all not null values and puts the result of each row in a new column of BIGDECIMAL AttributeType.

medianNumberMerge(Table, Column[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

mergeDateColumnsToTimeInterval(Table, Column, Column, SimpleDateFormat, String, String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merge 1 or 2 columns creating a time interval for each row.

mergeDateColumnsToTimeInterval(Table, Column, Column, SimpleDateFormat, String, String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

mergeNodes(Graph, Node[], Node, Column[], AttributeRowsMergeStrategy[], boolean) - Method in interface org.gephi.datalab.api.GraphElementsController

Merges 2 or more nodes into a new one node that has all the edges of the merged nodes.

mergeNodes(Graph, Node[], Node, Column[], AttributeRowsMergeStrategy[], boolean) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

mergeNumericColumnsToTimeInterval(Table, Column, Column, double, double) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merge 1 or 2 columns creating a time interval for each row.

mergeNumericColumnsToTimeInterval(Table, Column, Column, double, double) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

mergeRowsValues(Column[], AttributeRowsMergeStrategy[], Element[], Element, Element) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Merges the given rows values to the given result row using one merge strategy for each column of the table.

mergeRowsValues(Column[], AttributeRowsMergeStrategy[], Element[], Element, Element) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

minValueNumbersMerge(Table, Column[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merges any combination of number or number list columns, calculating the minimum value of all not null values and puts the result of each row in a new column of BIGDECIMAL AttributeType.

minValueNumbersMerge(Table, Column[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

N

negateBooleanColumn(Table, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Negates not null values of a given BOOLEAN or LIST_BOOLEANcolumn.

negateBooleanColumn(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

negateColumnBooleanType(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

Used to negate the values of a single boolean column.

negateColumnListBooleanType(Table, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

Used to negate all values of a list of boolean values column.

NodesManipulator - Interface in org.gephi.datalab.spi.nodes

Please note that the methods offered in this service are the same as Visualization API GraphContextMenuItem.

NodesManipulatorBuilder - Interface in org.gephi.datalab.spi.nodes

This interface is used for providing NodesManipulator instances using the Netbeans Lookup but avoiding the singleton it causes.

nodesToSearch - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

O

okButton - Variable in class org.gephi.datalab.api.DataLaboratoryHelper.DialogControlsImpl

onlyMatchWholeAttributeValue - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

org.gephi.datalab.api - package org.gephi.datalab.api

Data Laboratory API, all capabilites are exposed through various controllers.

org.gephi.datalab.api.datatables - package org.gephi.datalab.api.datatables

org.gephi.datalab.impl - package org.gephi.datalab.impl

org.gephi.datalab.spi - package org.gephi.datalab.spi

Interfaces for creating data laboratory plugins.

org.gephi.datalab.spi.columns - package org.gephi.datalab.spi.columns

org.gephi.datalab.spi.columns.merge - package org.gephi.datalab.spi.columns.merge

org.gephi.datalab.spi.edges - package org.gephi.datalab.spi.edges

org.gephi.datalab.spi.general - package org.gephi.datalab.spi.general

org.gephi.datalab.spi.nodes - package org.gephi.datalab.spi.nodes

org.gephi.datalab.spi.rows.merge - package org.gephi.datalab.spi.rows.merge

org.gephi.datalab.spi.values - package org.gephi.datalab.spi.values

org.gephi.datalab.utils - package org.gephi.datalab.utils

P

parseDateToDouble(SimpleDateFormat, String, double) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

parseDouble(String, double) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

PluginGeneralActionsManipulator - Interface in org.gephi.datalab.spi.general

This interface defines the same service as GeneralActionsManipulator, with one only change: the actions are shown in a drop down panel as plugins, to tell the difference between normal, basic general actions in data laboratory and plugins.

prepareDataTables() - Method in interface org.gephi.datalab.api.datatables.DataTablesController

Looks for an available DataTablesEventListenerBuilder and sets its DataTablesEventListener.

prepareDataTables() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

R

refreshCurrentTable() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to refresh the data of the table being shown.

refreshCurrentTable() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

regexPattern - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

regionStart - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

removeEdge(Edge, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

removeNode(Node, Graph) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

replace(SearchReplaceController.SearchResult, String) - Method in interface org.gephi.datalab.api.SearchReplaceController

Replaces a SearchResult with the given replacement String.

replace(SearchReplaceController.SearchResult, String) - Method in class org.gephi.datalab.impl.SearchReplaceControllerImpl

replaceAll(SearchReplaceController.SearchOptions, String) - Method in interface org.gephi.datalab.api.SearchReplaceController

Replaces all SearchResults that can be replaced with the given search options from the beginning to the end of the data.

replaceAll(SearchReplaceController.SearchOptions, String) - Method in class org.gephi.datalab.impl.SearchReplaceControllerImpl

resetStatus() - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

S

searchNodes - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

searchOptions - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchResult

searchOptions for finding next match.

SearchReplaceController - Interface in org.gephi.datalab.api

Independent controller for search/replace feature.

SearchReplaceController.SearchOptions - Class in org.gephi.datalab.api

Class that wraps the different possible options of search and provides various useful constructors.

SearchReplaceController.SearchOptions(Node[], Pattern) - Constructor for class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Setup options to search on nodes with the given pattern.

SearchReplaceController.SearchOptions(Edge[], Pattern) - Constructor for class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Setup options to search on edges with the given pattern.

SearchReplaceController.SearchOptions(Node[], Pattern, boolean) - Constructor for class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Setup options to search on nodes with the given pattern.

SearchReplaceController.SearchOptions(Edge[], Pattern, boolean) - Constructor for class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Setup options to search on edges with the given pattern.

SearchReplaceController.SearchResult - Class in org.gephi.datalab.api

Class that wraps the result of a search contaning the search options used for this result and the node or edge, row, column and start-end index of the value where ocurrence was found.

SearchReplaceController.SearchResult(SearchReplaceController.SearchOptions, Node, Edge, int, int, int, int) - Constructor for class org.gephi.datalab.api.SearchReplaceController.SearchResult

SearchReplaceControllerImpl - Class in org.gephi.datalab.impl

Implementation of the SearchReplaceController interface declared in the Data Laboratory API.

SearchReplaceControllerImpl() - Constructor for class org.gephi.datalab.impl.SearchReplaceControllerImpl

selectEdgesTable() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to show edges table.

selectEdgesTable() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

selectNodesTable() - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to show nodes table.

selectNodesTable() - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

selectTable(Table) - Method in interface org.gephi.datalab.api.datatables.DataTablesController

Request the tables implementation to show the given table (nodes or edges table)

selectTable(Table) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

setAttributeValue(Object, Element, Column) - Method in interface org.gephi.datalab.api.AttributeColumnsController

Sets a value to the given row,column pair (cell).

setAttributeValue(Object, Element, Column) - Method in class org.gephi.datalab.impl.AttributeColumnsControllerImpl

setAutoRefreshEnabled(boolean) - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Sets auto-refresh suspended state.

setAutoRefreshEnabled(boolean) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

setColumnsToSearch(int[]) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Set column indexes that should be used to search with the current options.

setColumnsToSearch(Column[]) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

Set column that should be used to search with the current options.

setDataTablesEventListener(DataTablesEventListener) - Method in interface org.gephi.datalab.api.datatables.DataTablesController

Register a listener for these requests.

setDataTablesEventListener(DataTablesEventListener) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

setEdgeTableSelection(Edge[]) - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to adapt the edges table row selection to the specified edges.

setEdgeTableSelection(Edge[]) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

setEnd(int) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

setFoundColumnIndex(int) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

setFoundEdge(Edge) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

setFoundNode(Node) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

setFoundRowIndex(int) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

setLoopToBeginning(boolean) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

setNodeFixed(Node, boolean) - Method in interface org.gephi.datalab.api.GraphElementsController

Sets the fixed state of a node to the indicated.

setNodeFixed(Node, boolean) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

setNodesFixed(Node[], boolean) - Method in interface org.gephi.datalab.api.GraphElementsController

Sets the fixed state of an array of nodes to the indicated.

setNodesFixed(Node[], boolean) - Method in class org.gephi.datalab.impl.GraphElementsControllerImpl

setNodeTableSelection(Node[]) - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to adapt the nodes table row selection to the specified nodes.

setNodeTableSelection(Node[]) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

setOkButtonEnabled(boolean) - Method in class org.gephi.datalab.api.DataLaboratoryHelper.DialogControlsImpl

setOkButtonEnabled(boolean) - Method in interface org.gephi.datalab.spi.DialogControls

Enable or disable the Ok button of the dialog for the UI.

setOnlyMatchWholeAttributeValue(boolean) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

setRegexPattern(Pattern) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

setRegionStart(int) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

setSearchOptions(SearchReplaceController.SearchOptions) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

setShowEdgesNodesLabels(boolean) - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to show edges nodes (source and target).

setShowEdgesNodesLabels(boolean) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

setShowOnlyVisible(boolean) - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to show only visible elements or not.

setShowOnlyVisible(boolean) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

setStart(int) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchResult

setStartingColumn(Integer) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

setStartingRow(Integer) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

setTimeIntervalGraphics(boolean) - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to show time intervals as graphics.

setTimeIntervalGraphics(boolean) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

setup(AttributeColumnsManipulator, GraphModel, Table, Column, DialogControls) - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulatorUI

Prepare this UI to be able to interact with its AttributeColumnsManipulator.

setup(Table, Column[]) - Method in interface org.gephi.datalab.spi.columns.merge.AttributeColumnsMergeStrategy

Prepare columns (with their table) for this merge strategy.

setup(Edge[], Edge) - Method in interface org.gephi.datalab.spi.edges.EdgesManipulator

Prepare edges for this action.

setup(Manipulator, DialogControls) - Method in interface org.gephi.datalab.spi.ManipulatorUI

Prepare this UI to be able to interact with its Manipulator.

setup(Node[], Node) - Method in interface org.gephi.datalab.spi.nodes.NodesManipulator

Prepare nodes for this action.

setup(Element[], Element, Column) - Method in interface org.gephi.datalab.spi.rows.merge.AttributeRowsMergeStrategy

Prepare column and rows for this merge strategy.

setup(Element, Column) - Method in interface org.gephi.datalab.spi.values.AttributeValueManipulator

Prepare the AttributeValue data.

setUseRegexReplaceMode(boolean) - Method in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

setUseSparklines(boolean) - Method in interface org.gephi.datalab.api.datatables.DataTablesCommonInterface

Requests the tables implementation to show number lists and dynamic numbers as sparklines.

setUseSparklines(boolean) - Method in class org.gephi.datalab.impl.DataTablesControllerImpl

showAttributeRowsMergeStrategyUIDialog(AttributeRowsMergeStrategy) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

This method shows the UI of an AttributeRowsMergeStrategy if it is provided and the AttributeRowsMergeStrategy can be executed.

sortAttributeColumnsManipulators(ArrayList<? extends AttributeColumnsManipulator>) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

sortManipulators(ArrayList<? extends Manipulator>) - Method in class org.gephi.datalab.api.DataLaboratoryHelper

start - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchResult

startingColumn - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

startingRow - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

sumNumbersMerge(Table, Column[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merges any combination of number or number list columns, calculating the sum of all not null values and puts the result of each row in a new column of BIGDECIMAL AttributeType.

sumNumbersMerge(Table, Column[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

SupportedColumnTypeWrapper - Class in org.gephi.datalab.utils

Simple wrapper class for column type selection in UI.

SupportedColumnTypeWrapper(Class) - Constructor for class org.gephi.datalab.utils.SupportedColumnTypeWrapper

T

thirdQuartileNumberMerge(Table, Column[], String) - Method in interface org.gephi.datalab.api.AttributeColumnsMergeStrategiesController

Merges any combination of number or number list columns, calculating the third quartile (Q3) of all not null values and puts the result of each row in a new column of BIGDECIMAL AttributeType.

thirdQuartileNumberMerge(Table, Column[], String) - Method in class org.gephi.datalab.impl.AttributeColumnsMergeStrategiesControllerImpl

toString() - Method in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

type - Variable in class org.gephi.datalab.utils.SupportedColumnTypeWrapper

U

unSetup() - Method in interface org.gephi.datalab.spi.columns.AttributeColumnsManipulatorUI

Called when the window is closed or accepted.

unSetup() - Method in interface org.gephi.datalab.spi.ManipulatorUI

Called when the dialog is closed, canceled or accepted.

useRegexReplaceMode - Variable in class org.gephi.datalab.api.SearchReplaceController.SearchOptions

V

valueOf(String) - Static method in enum org.gephi.datalab.api.AttributeColumnsMergeStrategiesController.BooleanOperations

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gephi.datalab.api.datatables.DataTablesCommonInterface.ExportMode

Returns the enum constant of this type with the specified name.

values() - Static method in enum org.gephi.datalab.api.AttributeColumnsMergeStrategiesController.BooleanOperations

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gephi.datalab.api.datatables.DataTablesCommonInterface.ExportMode

Returns an array containing the constants of this enum type, in the order they are declared.

W

writeCSVFile(Graph, Table, OutputStream) - Static method in class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

Export a AttributeTable to the specified file.

writeCSVFile(Graph, Table, File) - Static method in class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

Export a AttributeTable to the specified file.

writeCSVFile(Graph, Table, File, Character, Charset, Integer[], Element[]) - Static method in class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

Export a AttributeTable to the specified file.

writeCSVFile(Graph, Table, OutputStream, Character, Charset, Integer[], Element[]) - Static method in class org.gephi.datalab.api.datatables.AttributeTableCSVExporter

Export a AttributeTable to the specified file.

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